This class will cover an introduction to command line tools for managing genomic data. It will start with basic Unix commands for managing files and directories, followed by a review of the main starndardized data formats and hands-on instruction on how to use popular tools such as Samtools, Bedtools, Bowtie, and application specific technologies such as Bcftools and Cufflinks.
| Instructor: | Professor Jeff Leek, PhD |
| Provided by: | Coursera |
| Course language: | English |
| Fees: | free course |
| Level: | intermediate |
| Certificate available? | (fee) |
| Format: | MOOC/online course |
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